Best TWAS P=1.46e-07 · Best GWAS P=3.73e-06 conditioned to 0.736
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | SNX19 | 0.11 | 0.19 | enet | 15 | 0.24 | 3.2e-26 | -4.5 | 5.3 | 1.5e-07 | 0.85 | 0.01 | 0.96 | TRUE |
| 2 | The Cancer Genome Atlas | Brain Lower Grade Glioma | SNX19 | 0.17 | 0.20 | lasso | 6 | 0.23 | 9.8e-26 | -4.5 | 5.2 | 2.4e-07 | 0.80 | 0.01 | 0.96 | FALSE |
| 3 | The Cancer Genome Atlas | Thyroid Carcinoma | SNX19 | 0.24 | 0.23 | lasso | 8 | 0.32 | 2.6e-32 | 4.6 | 5.2 | 1.6e-07 | 0.90 | 0.01 | 0.97 | FALSE |