Best TWAS P=1.12e-08 · Best GWAS P=7.58e-07 conditioned to 4.2e-05
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Adipose Subcutaneous | TSPY26P | 0.08 | 0.01 | lasso | 4 | 0.03 | 1.7e-03 | -4.3 | -5.7 | 1.1e-08 | -0.10 | 0.06 | 0.66 | TRUE |
| 2 | GTEx | Brain Cerebellum | TSPY26P | 0.25 | 0.06 | lasso | 6 | 0.15 | 2.9e-05 | 3.9 | -5.2 | 2.3e-07 | -0.09 | 0.05 | 0.32 | FALSE |
| 3 | NTR | Blood | C20orf160 | 0.01 | 0.00 | bslmm | 305 | 0.00 | 8.0e-03 | -4.5 | 5.5 | 4.3e-08 | 0.10 | 0.03 | 0.10 | TRUE |