Best TWAS P=4.16e-09 · Best GWAS P=1.34e-09 conditioned to 0.000622
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Testis | NCALD | 0.24 | 0.20 | lasso | 5 | 0.19 | 9.2e-09 | -5.2 | 5.3 | 1.3e-07 | -0.72 | 0.17 | 0.82 | FALSE |
| 2 | GTEx | Testis | KB-1107E3.1 | 0.26 | 0.08 | enet | 31 | 0.10 | 2.8e-05 | -5.2 | 5.9 | 4.2e-09 | -0.54 | 0.12 | 0.79 | TRUE |