Best TWAS P=6.63e-09 · Best GWAS P=9.1e-17 conditioned to 1.29e-08
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | SLC22A3 | 0.10 | 0.02 | blup | 582 | 0.05 | 4.4e-07 | 2.8 | 5.8 | 6.6e-09 | 0.09 | 0.93 | 0.05 | TRUE |
| 2 | The Cancer Genome Atlas | Breast Invasive Carcinoma | SLC22A1 | 0.04 | 0.01 | enet | 17 | 0.01 | 5.2e-04 | 4.5 | -5.5 | 4.5e-08 | -0.59 | 0.01 | 0.94 | TRUE |