TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Medication: Ramipril
:
→
chr11:99,859,184-101,559,718
Best TWAS P=8.83e-09 · Best GWAS P=9.93e-09 conditioned to 1
99.8M
100M
100.2M
100.4M
100.6M
100.8M
101M
101.2M
101.4M
101.6M
0
2
4
6
8
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
GTEx
Artery Tibial
ARHGAP42
0.24
0.24
lasso
4
0.24
2.4e-18
-5.7
-5.8
8.8e-09
0.98
0
1
TRUE
1
GTEx
Artery Aorta
ARHGAP42
0.22
0.15
enet
18
0.19
1.7e-10
-5.5
-5.3
1.1e-07
0.86
0
1
FALSE
3
GTEx
Artery Tibial
TMEM133
0.26
0.25
enet
28
0.27
1.3e-21
-5.7
-5.2
1.7e-07
0.94
0
1
FALSE