Best TWAS P=1.11e-07 · Best GWAS P=2.67e-08 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Artery Aorta | PHACTR1 | 0.19 | 0.09 | enet | 25 | 0.12 | 5.7e-07 | -5.6 | 5.2 | 2.5e-07 | -0.86 | 0 | 1 | FALSE |
2 | GTEx | Artery Aorta | RP1-257A7.5 | 0.11 | 0.14 | lasso | 3 | 0.13 | 1.7e-07 | -5.6 | 5.3 | 1.1e-07 | -0.95 | 0 | 1 | TRUE |