[Hub]/) : Traits : Sitting height :

chr10:4,236,655-5,844,628

Best TWAS P=1.04e-33 · Best GWAS P=3.19e-33 conditioned to 1

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex AKR1C1 0.30 0.16 bslmm 703 0.18 3.5e-21 3.3 7.2 4.7e-13 -0.55 1.00 0.00 FALSE
2 CommonMind Brain Pre-frontal Cortex AKR1C2 0.31 0.06 bslmm 665 0.16 2.1e-19 2.6 -8.2 1.6e-16 0.74 0.10 0.90 FALSE
3 GTEx Adrenal Gland AKR1C1 0.33 0.08 enet 11 0.07 1.8e-03 4.2 -5.3 8.9e-08 0.42 0.49 0.04 FALSE
4 GTEx Artery Tibial AKR1C2 0.14 0.10 enet 10 0.15 1.2e-11 -11.9 -11.3 8.8e-30 0.94 0.00 1.00 FALSE
5 GTEx Brain Cerebellar Hemisphere AKR1C1 0.46 0.14 lasso 4 0.23 1.4e-06 -6.2 10.3 7.5e-25 -0.85 0.01 0.96 FALSE
6 GTEx Brain Cerebellum AKR1C2 0.27 0.04 enet 12 0.11 4.1e-04 -11.9 -7.0 1.8e-12 0.68 0.01 0.97 FALSE
7 GTEx Brain Cortex AKR1C2 0.49 0.10 lasso 11 0.26 1.1e-07 -12.0 -10.0 1.6e-23 0.85 0.00 0.98 FALSE
8 GTEx Brain Hippocampus AKR1C2 0.35 0.13 lasso 9 0.16 1.3e-04 -6.5 -6.3 3.9e-10 0.49 0.07 0.78 FALSE
9 GTEx Cells Transformed fibroblasts AKR1C2 0.28 0.23 lasso 6 0.21 1.9e-15 -12.0 -12.1 1.0e-33 1.00 0.00 1.00 TRUE
10 GTEx Esophagus Muscularis AKR1C2 0.30 0.21 lasso 2 0.19 8.5e-12 -12.0 -12.0 3.6e-33 1.00 0.00 1.00 FALSE
11 GTEx Heart Atrial Appendage AKR1C2 0.28 0.37 lasso 3 0.29 1.2e-13 -11.9 -11.9 1.7e-32 0.98 0.00 1.00 FALSE
12 GTEx Muscle Skeletal AKR1C2 0.11 0.03 enet 9 0.05 2.0e-05 -1.8 7.2 4.8e-13 -0.55 0.06 0.84 FALSE
13 GTEx Ovary AKR1C3 0.35 0.20 lasso 9 0.22 3.9e-06 -12.0 -11.5 8.1e-31 0.91 0.00 0.97 FALSE
14 GTEx Skin Sun Exposed Lower leg AKR1C2 0.17 0.18 lasso 2 0.18 4.0e-15 -11.9 -12.0 4.8e-33 1.00 0.00 1.00 FALSE
15 GTEx Testis AKR1C2 0.44 0.36 lasso 4 0.36 8.5e-17 -12.0 -11.8 3.2e-32 1.00 0.00 1.00 FALSE
16 GTEx Testis AKR1C1 0.28 0.04 enet 39 0.07 3.7e-04 -11.8 8.9 7.3e-19 -0.62 0.01 0.94 FALSE
17 ROSMAP Brain Pre-frontal Cortex AKR1C2 0.56 0.40 enet 28 0.46 1.0e-65 -12.0 -11.5 9.0e-31 0.93 0.00 1.00 FALSE
18 ROSMAP Brain Pre-frontal Cortex AKR1C1 0.39 0.28 lasso 6 0.32 9.1e-42 3.3 6.7 1.7e-11 -0.61 1.00 0.00 FALSE
19 The Cancer Genome Atlas Breast Invasive Carcinoma AKR1C1 0.01 0.00 blup 81 0.01 7.5e-03 4.4 -5.6 1.8e-08 0.43 0.03 0.39 FALSE
20 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma AKR1C1 0.07 0.04 enet 10 0.02 1.0e-03 -11.8 11.2 3.1e-29 -0.88 0.00 0.98 FALSE
21 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma AKR1C2 0.12 0.11 lasso 6 0.09 1.6e-10 -12.0 -12.0 3.8e-33 1.00 0.00 1.00 FALSE
22 The Cancer Genome Atlas Kidney Renal Papillary Cell Carcinoma AKR1C1 0.15 0.02 blup 81 0.06 2.0e-04 3.3 6.7 1.6e-11 -0.59 0.00 0.86 FALSE
23 The Cancer Genome Atlas Kidney Renal Papillary Cell Carcinoma AKR1C2 0.29 0.21 lasso 1 0.21 4.7e-12 -11.9 -11.9 1.9e-32 0.98 0.01 0.99 FALSE
24 The Cancer Genome Atlas Brain Lower Grade Glioma AKR1C2 0.09 0.05 blup 62 0.05 3.4e-06 -11.8 -10.7 1.4e-26 0.89 0.00 1.00 FALSE
25 The Cancer Genome Atlas Prostate Adenocarcinoma AKR1C2 0.39 0.18 enet 14 0.23 2.5e-23 -12.0 -10.9 1.6e-27 0.85 0.00 1.00 FALSE
26 The Cancer Genome Atlas Soft Tissue Sarcoma AKR1C2 0.07 0.04 enet 5 0.06 1.1e-04 -6.2 -9.1 6.8e-20 0.74 0.02 0.79 FALSE
27 The Cancer Genome Atlas Thyroid Carcinoma AKR1C2 0.09 0.08 lasso 3 0.08 7.2e-08 -11.8 -11.3 1.5e-29 0.90 0.00 1.00 FALSE