Best TWAS P=8.39e-11 · Best GWAS P=2.87e-12 conditioned to 1.09e-10
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Artery Tibial | B4GALNT3 | 0.49 | 0.24 | enet | 24 | 0.34 | 6.5e-28 | 5.6 | -6.5 | 8.4e-11 | -0.04 | 0.0 | 1.00 | TRUE |
2 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | ERC1 | 0.10 | 0.02 | blup | 219 | 0.06 | 7.6e-07 | -2.7 | -5.7 | 1.0e-08 | 0.16 | 0.3 | 0.03 | TRUE |