Best TWAS P=2.11e-08 · Best GWAS P=4.13e-09 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Nerve Tibial | YAP1 | 0.09 | 0.07 | lasso | 4 | 0.05 | 1.5e-04 | 5.5 | 5.6 | 2.6e-08 | 0.86 | 0.02 | 0.97 | FALSE |
2 | GTEx | Testis | RP11-864G5.3 | 0.15 | 0.18 | lasso | 1 | 0.15 | 2.5e-07 | 5.6 | 5.6 | 2.1e-08 | 0.95 | 0.02 | 0.98 | TRUE |