TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Birth weight
:
←
→
chr3:122,306,920-123,860,565
Best TWAS P=1.56e-18 · Best GWAS P=3.28e-24 conditioned to 2.51e-11
122.4M
122.6M
122.8M
123M
123.2M
123.4M
123.6M
123.8M
0
5
10
15
20
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
4
GTEx
Lung
RP11-797D24.4
0.08
0.01
enet
10
0.03
4.1e-03
-7.6
8.8
1.6e-18
0.50
0.06
0.86
TRUE
2
GTEx
Artery Tibial
ADCY5
0.17
0.03
lasso
6
0.04
8.9e-04
-7.6
7.6
2.8e-14
0.36
0.91
0.07
FALSE
3
GTEx
Artery Tibial
RP11-797D24.4
0.20
0.03
lasso
5
0.05
9.4e-05
-7.6
7.5
5.0e-14
0.37
0.92
0.06
FALSE
1
GTEx
Artery Aorta
RP11-797D24.4
0.17
0.03
lasso
3
0.06
2.6e-04
-6.0
5.8
5.8e-09
0.28
0.25
0.03
FALSE