Best TWAS P=5.72e-08 · Best GWAS P=2.56e-08 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Artery Aorta | AC009228.1 | 0.1 | 0.06 | lasso | 2 | 0.04 | 4.4e-03 | -5.4 | -5.4 | 5.7e-08 | 0.99 | 0.01 | 0.98 | TRUE |
2 | GTEx | Thyroid | ITSN2 | 0.1 | 0.06 | enet | 21 | 0.06 | 3.1e-05 | -5.1 | -5.2 | 2.5e-07 | 0.92 | 0.02 | 0.98 | FALSE |