Best TWAS P=4.46e-09 · Best GWAS P=2.53e-08 conditioned to 0.00595
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Uterus | SNAI3-AS1 | 0.47 | 0.00 | enet | 13 | 0.04 | 5.3e-02 | -2.7 | 5.4 | 7.2e-08 | -0.59 | 0.03 | 0.40 | FALSE |
| 2 | GTEx | Whole Blood | SNAI3-AS1 | 0.15 | 0.04 | enet | 21 | 0.10 | 6.7e-10 | 1.8 | 5.9 | 4.5e-09 | -0.56 | 0.06 | 0.93 | TRUE |
| 3 | The Cancer Genome Atlas | Glioblastoma Multiforme | SNAI3 | 0.19 | 0.06 | enet | 7 | 0.12 | 1.6e-04 | 2.6 | -5.4 | 5.8e-08 | 0.68 | 0.00 | 0.62 | FALSE |