TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Forced expiratory volume in 1-second (FEV1), Best measure
:
←
chr22:29,707,908-31,171,274
Best TWAS P=2.37e-11 · Best GWAS P=2.25e-13 conditioned to 0.000693
29.8M
30M
30.2M
30.4M
30.6M
30.8M
31M
31.2M
0
5
10
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Adipose Subcutaneous
CTA-85E5.10
0.10
0.04
lasso
9
0.03
0.0019
5.873
-6.7
2.4e-11
-0.78
0.03
0.96
TRUE
2
The Cancer Genome Atlas
Brain Lower Grade Glioma
ASCC2
0.04
0.00
blup
48
0.01
0.0111
-0.001
-5.4
5.6e-08
-0.45
0.01
0.57
FALSE