Best TWAS P=7.1e-09 · Best GWAS P=1.97e-09 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Nerve Tibial | IPO8 | 0.21 | 0.16 | lasso | 6 | 0.15 | 1.3e-10 | -5.8 | -5.8 | 7.1e-09 | 1.00 | 0.02 | 0.98 | TRUE |
2 | GTEx | Skin Sun Exposed Lower leg | IPO8 | 0.23 | 0.08 | lasso | 10 | 0.13 | 1.1e-10 | -5.9 | -5.2 | 2.4e-07 | 0.87 | 0.03 | 0.97 | FALSE |