Best TWAS P=1.28e-07 · Best GWAS P=6.73e-07 conditioned to 0.58
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Skin Not Sun Exposed Suprapubic | CEP63 | 0.22 | 0.20 | enet | 29 | 0.24 | 1.1e-13 | 4.9 | -5.3 | 1.5e-07 | -0.93 | 0.02 | 0.97 | FALSE |
2 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | ANAPC13 | 0.23 | 0.07 | blup | 38 | 0.11 | 1.1e-04 | 4.9 | -5.3 | 1.3e-07 | -0.89 | 0.02 | 0.97 | TRUE |