TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Body mass index (BMI)
:
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chr17:15,149,905-16,895,160
Best TWAS P=4.33e-08 · Best GWAS P=2.46e-07 conditioned to 0.338
15.2M
15.4M
15.6M
15.8M
16M
16.2M
16.4M
16.6M
16.8M
0
2
4
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
GTEx
Whole Blood
ADORA2B
0.08
0.00
lasso
5
0.00
2.5e-01
-4.8
-5.5
4.3e-08
0.85
0.05
0.61
TRUE
1
GTEx
Spleen
ADORA2B
0.23
0.27
enet
10
0.24
7.4e-07
-5.0
-5.3
1.3e-07
0.97
0.05
0.94
FALSE
4
The Cancer Genome Atlas
Lung Squamous Cell Carcinoma
TTC19
0.03
0.03
enet
8
0.03
2.0e-04
-5.0
5.2
2.3e-07
-0.97
0.03
0.96
FALSE
3
YFS
Blood
PIGL
0.02
0.02
blup
279
0.02
1.5e-06
-3.2
-5.1
3.0e-07
0.88
0.22
0.77
FALSE