TWAS
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Traits
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Traits
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Body mass index (BMI)
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chr19:46,923,752-48,406,374
Best TWAS P=1.71e-12 · Best GWAS P=6.57e-31 conditioned to 5.99e-22
47M
47.2M
47.4M
47.6M
47.8M
48M
48.2M
48.4M
0
5
10
15
20
25
30
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Cells EBV-transformed lymphocytes
SAE1
0.21
0.09
lasso
3
0.07
2.0e-03
-4.9
-7.1
1.7e-12
0.77
0.06
0.67
TRUE
2
METSIM
Adipose
SAE1
0.12
0.04
lasso
5
0.07
1.7e-10
-5.1
-6.5
9.5e-11
0.61
0.61
0.39
FALSE
3
YFS
Blood
SAE1
0.07
0.02
enet
18
0.05
3.6e-16
-6.6
-5.7
1.2e-08
0.56
0.99
0.01
FALSE