TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Weight
:
←
→
chr4:686,563-2,414,668
Best TWAS P=4.47e-09 · Best GWAS P=4.32e-10 conditioned to 0.000303
0.6M
0.8M
1M
1.2M
1.4M
1.6M
1.8M
2M
2.2M
2.4M
0
2
4
6
8
10
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
4
GTEx
Nerve Tibial
CRIPAK
0.50
0.11
enet
76
0.38
1.1e-28
-3.1
-5.9
4.5e-09
-0.08
1.00
0.00
TRUE
2
GTEx
Colon Transverse
TMEM129
0.23
0.05
lasso
4
0.03
1.8e-02
-4.3
5.2
1.5e-07
0.51
0.09
0.09
TRUE
3
GTEx
Lung
CRIPAK
0.61
0.22
enet
46
0.41
1.1e-33
-3.4
-5.4
6.4e-08
0.02
1.00
0.00
FALSE
5
NTR
Blood
CRIPAK
0.13
0.09
enet
31
0.15
1.5e-46
-2.2
-5.4
7.1e-08
0.00
1.00
0.00
FALSE
1
GTEx
Brain Hippocampus
CRIPAK
0.48
0.22
lasso
4
0.23
4.0e-06
-3.1
-5.1
2.8e-07
0.00
0.18
0.15
FALSE