TWAS
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Usage
Models
Genes
Traits
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Traits
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chr4:88,762,296-89,397,091
Best TWAS P=2.4e-07 · Best GWAS P=4.16e-06 conditioned to 0.0279
88.8M
88.9M
89M
89.1M
89.2M
89.3M
89.4M
0
1
2
3
4
5
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
The Cancer Genome Atlas
Head and Neck Squamous Cell Carcinoma
ABCG2
0.04
0.02
blup
100
0.04
1.8e-05
-4.4
-5.2
2.4e-07
0.53
0.01
0.77
TRUE