TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Weight
:
←
→
chr6:51,230,788-52,198,802
Best TWAS P=4.42e-08 · Best GWAS P=7.76e-12 conditioned to 3.85e-05
51.2M
51.4M
51.6M
51.8M
52M
52.2M
0
2
4
6
8
10
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
The Cancer Genome Atlas
Lung Squamous Cell Carcinoma
PKHD1
0.04
0.05
lasso
3
0.05
1.7e-06
5.3
-5.5
4.4e-08
-0.78
0.34
0.66
TRUE