Best TWAS P=7.89e-11 · Best GWAS P=1.09e-09 conditioned to 0.781
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Skin Not Sun Exposed Suprapubic | MAN1A2 | 0.15 | 0.16 | lasso | 2 | 0.15 | 1.1e-08 | -5.9 | 5.9 | 4.1e-09 | -0.75 | 0.02 | 0.98 | FALSE |
2 | GTEx | Skin Sun Exposed Lower leg | MAN1A2 | 0.15 | 0.08 | enet | 11 | 0.09 | 3.0e-08 | -5.9 | 6.5 | 7.9e-11 | -0.92 | 0.01 | 0.99 | TRUE |