Best TWAS P=1.35e-07 · Best GWAS P=2.72e-07 conditioned to 1.3e-07
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Ovary | RBL2 | 0.41 | 0.26 | enet | 29 | 0.18 | 3.2e-05 | -4.5 | 5.2 | 2.6e-07 | 0.16 | 0.09 | 0.84 | FALSE |
2 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | RBL2 | 0.11 | 0.08 | blup | 44 | 0.06 | 1.5e-03 | -4.8 | 5.3 | 1.4e-07 | -0.03 | 0.01 | 0.60 | TRUE |