Best TWAS P=1.01e-08 · Best GWAS P=3.47e-10 conditioned to 0.0101
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | ZNF652 | 0.03 | 0.03 | enet | 5 | 0.03 | 0.00026 | 5.6 | -5.7 | 1.0e-08 | -0.89 | 0.01 | 0.98 | TRUE |
| 2 | The Cancer Genome Atlas | Brain Lower Grade Glioma | ZNF652 | 0.06 | 0.03 | lasso | 4 | 0.02 | 0.00165 | 5.5 | -5.2 | 2.3e-07 | -0.74 | 0.04 | 0.90 | FALSE |
| 3 | The Cancer Genome Atlas | Lung Adenocarcinoma | ZNF652 | 0.05 | 0.02 | blup | 55 | 0.02 | 0.00249 | 6.2 | -5.7 | 1.1e-08 | -0.86 | 0.01 | 0.97 | FALSE |