Best TWAS P=9.81e-09 · Best GWAS P=8.19e-11 conditioned to 0.00157
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Thyroid | BAI2 | 0.31 | 0.23 | lasso | 6 | 0.22 | 1.4e-16 | 5.7 | 5.7 | 9.8e-09 | 0.81 | 0.20 | 0.80 | TRUE |
| 2 | The Cancer Genome Atlas | Lung Adenocarcinoma | COL16A1 | 0.04 | 0.03 | lasso | 4 | 0.03 | 5.2e-04 | 5.8 | -5.2 | 2.5e-07 | -0.82 | 0.02 | 0.85 | FALSE |