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chr10:133,309,117-135,192,153

Best TWAS P=6.02e-11 · Best GWAS P=9.69e-12 conditioned to 1

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
10	The Cancer Genome Atlas	Kidney Renal Papillary Cell Carcinoma	DPYSL4	0.17	0.24	lasso	3	0.23	2.4e-13	6.8	6.5	6.0e-11	0.98	0.00	1.00	TRUE
14	The Cancer Genome Atlas	Lung Adenocarcinoma	GPR123	0.05	0.00	blup	56	0.02	8.0e-04	3.7	6.2	7.2e-10	0.00	0.00	0.26	TRUE
4	GTEx	Testis	STK32C	0.46	0.42	lasso	6	0.42	3.4e-20	4.4	-5.2	2.6e-07	-0.09	1.00	0.00	TRUE
12	The Cancer Genome Atlas	Liver Hepatocellular Carcinoma	DPYSL4	0.13	0.11	enet	7	0.08	2.0e-04	6.5	6.5	7.2e-11	0.96	0.01	0.97	FALSE
6	The Cancer Genome Atlas	Cervical Squamous Cell Carcinoma	DPYSL4	0.31	0.19	lasso	10	0.18	3.4e-09	6.5	6.2	5.0e-10	0.91	0.00	1.00	FALSE
11	The Cancer Genome Atlas	Brain Lower Grade Glioma	DPYSL4	0.13	0.12	lasso	7	0.16	3.1e-17	6.8	6.0	2.1e-09	0.93	0.00	1.00	FALSE
7	The Cancer Genome Atlas	Glioblastoma Multiforme	STK32C	0.13	-0.01	blup	107	0.08	1.6e-03	2.9	-6.0	2.3e-09	-0.35	0.04	0.07	FALSE
3	GTEx	Pituitary	DPYSL4	0.24	0.11	lasso	4	0.26	3.0e-07	3.6	5.9	3.5e-09	0.63	0.02	0.81	FALSE
13	The Cancer Genome Atlas	Lung Adenocarcinoma	DPYSL4	0.17	0.16	enet	18	0.23	1.5e-26	6.8	5.7	1.2e-08	0.86	0.00	1.00	FALSE
16	The Cancer Genome Atlas	Prostate Adenocarcinoma	DPYSL4	0.34	0.37	enet	15	0.46	2.2e-53	-5.9	5.7	1.3e-08	0.92	0.01	0.99	FALSE
9	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	DPYSL4	0.16	0.21	enet	16	0.24	7.1e-27	6.5	5.7	1.4e-08	0.91	0.00	1.00	FALSE
1	CommonMind	Brain Pre-frontal Cortex	DPYSL4	0.09	0.03	enet	16	0.05	9.9e-07	6.8	5.4	5.3e-08	0.80	0.00	1.00	FALSE
2	GTEx	Cells Transformed fibroblasts	DPYSL4	0.53	0.39	enet	14	0.58	1.1e-52	6.8	5.4	6.5e-08	0.88	0.00	1.00	FALSE
18	The Cancer Genome Atlas	Testicular Germ Cell Tumors	DPYSL4	0.17	0.12	blup	64	0.11	1.3e-04	-5.9	5.4	7.8e-08	0.85	0.02	0.96	FALSE
5	The Cancer Genome Atlas	Breast Invasive Carcinoma	DPYSL4	0.19	0.30	enet	19	0.37	3.1e-79	6.5	5.4	8.5e-08	0.89	0.01	0.99	FALSE
17	The Cancer Genome Atlas	Skin Cutaneous Melanoma	DPYSL4	0.27	0.07	blup	64	0.07	7.1e-03	6.5	5.4	8.5e-08	0.88	0.01	0.73	FALSE
15	The Cancer Genome Atlas	Ovarian Serous Cystadenocarcinoma	DPYSL4	0.24	0.21	lasso	7	0.28	2.5e-19	6.5	5.3	1.0e-07	0.84	0.00	1.00	FALSE
8	The Cancer Genome Atlas	Head and Neck Squamous Cell Carcinoma	DPYSL4	0.16	0.24	blup	60	0.27	7.6e-31	-5.9	5.3	1.5e-07	0.91	0.02	0.98	FALSE
19	The Cancer Genome Atlas	Thyroid Carcinoma	DPYSL4	0.30	0.24	enet	15	0.38	1.7e-38	2.2	5.3	1.5e-07	0.77	0.01	0.99	FALSE