TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Whole body fat mass
:
←
→
chr2:53,583,159-55,231,928
Best TWAS P=3.12e-09 · Best GWAS P=3.37e-08 conditioned to 0.039
53.6M
53.8M
54M
54.2M
54.4M
54.6M
54.8M
55M
55.2M
0
2
4
6
8
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
CommonMind
Brain Pre-frontal Cortex
ACYP2
0.06
0.02
blup
561
0.03
4.8e-05
-4.8
5.9
3.1e-09
-0.68
0.01
0.98
TRUE
2
GTEx
Testis
HMGB1P31
0.17
0.01
enet
21
0.02
4.6e-02
-2.0
-5.5
4.4e-08
0.60
0.11
0.64
FALSE