TWAS
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Usage
Models
Genes
Traits
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Traits
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Whole body fat-free mass
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chr7:17,133,294-18,674,435
Best TWAS P=1.31e-07 · Best GWAS P=9.64e-09 conditioned to 0.00816
17.2M
17.4M
17.6M
17.8M
18M
18.2M
18.4M
18.6M
0
2
4
6
8
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
The Cancer Genome Atlas
Colon Adenocarcinoma
SNX13
0.15
0.16
lasso
3
0.18
1.7e-10
5.2
-5.3
1.3e-07
0.76
0.03
0.97
TRUE
1
GTEx
Testis
SNX13
0.21
0.14
enet
15
0.13
2.0e-06
-5.1
5.2
1.5e-07
-0.75
0.16
0.84
FALSE