Best TWAS P=1.31e-07 · Best GWAS P=9.64e-09 conditioned to 0.00816
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Testis | SNX13 | 0.21 | 0.14 | enet | 15 | 0.13 | 2.0e-06 | -5.1 | 5.2 | 1.5e-07 | -0.75 | 0.16 | 0.84 | FALSE |
| 2 | The Cancer Genome Atlas | Colon Adenocarcinoma | SNX13 | 0.15 | 0.16 | lasso | 3 | 0.18 | 1.7e-10 | 5.2 | -5.3 | 1.3e-07 | 0.76 | 0.03 | 0.97 | TRUE |