TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Whole body fat-free mass
:
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chr8:24,591,784-26,007,894
Best TWAS P=3.91e-08 · Best GWAS P=5.22e-09 conditioned to 0.000155
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
The Cancer Genome Atlas
Lung Adenocarcinoma
KCTD9
0.03
0.01
blup
75
0.01
1.1e-02
-5.7
-5.5
3.9e-08
-0.45
0.02
0.71
TRUE
1
GTEx
Muscle Skeletal
KCTD9
0.11
0.07
lasso
5
0.06
7.9e-07
-4.8
-5.3
1.4e-07
-0.56
0.14
0.85
FALSE