TWAS
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Genes
Traits
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Traits
:
Basal metabolic rate
:
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chr1:109,316,076-110,733,794
Best TWAS P=1.49e-08 · Best GWAS P=4.22e-06 conditioned to 0.752
109.4M
109.6M
109.8M
110M
110.2M
110.4M
110.6M
110.8M
0
1
2
3
4
5
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
GTEx
Liver
ATXN7L2
0.39
0.04
lasso
12
0.21
1.3e-06
4.6
5.7
1.5e-08
0.78
0.03
0.78
TRUE
1
GTEx
Liver
SYPL2
0.34
0.27
lasso
5
0.30
4.6e-09
4.1
5.1
2.8e-07
0.85
0.04
0.89
FALSE