TWAS
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About
Usage
Models
Genes
Traits
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Traits
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Basal metabolic rate
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chr17:1,717,695-2,453,908
Best TWAS P=3.63e-09 · Best GWAS P=1.03e-10 conditioned to 1.87e-10
1.7M
1.8M
1.9M
2M
2.1M
2.2M
2.3M
2.4M
0
2
4
6
8
10
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
The Cancer Genome Atlas
Breast Invasive Carcinoma
SMG6
0.03
0.01
blup
144
0.01
0.00478
5.0
5.9
3.6e-09
-0.02
0.06
0.74
TRUE
2
The Cancer Genome Atlas
Kidney Renal Papillary Cell Carcinoma
SMG6
0.08
0.05
blup
144
0.07
0.00013
5.7
5.6
2.2e-08
-0.01
0.01
0.99
FALSE