Best TWAS P=1.79e-36 · Best GWAS P=3.36e-43 conditioned to 0.792
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | OTUD4 | 0.06 | 0.04 | bslmm | 272 | 0.04 | 2.6e-05 | -10.7 | -8.2 | 1.8e-16 | -0.39 | 0.83 | 0.06 | FALSE |
| 2 | GTEx | Brain Hypothalamus | HHIP-AS1 | 0.12 | 0.02 | enet | 16 | 0.04 | 4.6e-02 | 8.8 | 8.7 | 2.5e-18 | 0.21 | 0.07 | 0.09 | TRUE |
| 3 | GTEx | Pancreas | ANAPC10 | 0.14 | 0.10 | lasso | 3 | 0.10 | 4.3e-05 | -12.0 | 11.6 | 6.7e-31 | 0.60 | 0.32 | 0.11 | TRUE |
| 4 | ROSMAP | Brain Pre-frontal Cortex | OTUD4 | 0.04 | 0.03 | lasso | 2 | 0.03 | 1.4e-04 | 12.4 | -12.6 | 1.8e-36 | -0.85 | 0.12 | 0.82 | TRUE |