Best TWAS P=2.61e-10 · Best GWAS P=9.99e-14 conditioned to 7.41e-05
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Esophagus Muscularis | RPS20 | 0.12 | 0.04 | lasso | 6 | 0.05 | 7.2e-04 | 6.2 | 6.3 | 2.6e-10 | 0.81 | 0.18 | 0.70 | TRUE |
| 2 | GTEx | Skin Not Sun Exposed Suprapubic | RPS20 | 0.18 | 0.03 | enet | 12 | 0.07 | 1.5e-04 | 5.9 | 5.8 | 7.3e-09 | 0.80 | 0.18 | 0.36 | FALSE |
| 3 | The Cancer Genome Atlas | Brain Lower Grade Glioma | RPS20 | 0.33 | 0.07 | enet | 8 | 0.07 | 1.7e-08 | 5.2 | 5.2 | 2.6e-07 | 0.52 | 0.00 | 0.99 | FALSE |
| 4 | The Cancer Genome Atlas | Prostate Adenocarcinoma | RPS20 | 0.04 | 0.03 | lasso | 3 | 0.04 | 1.3e-04 | 5.2 | 5.4 | 5.1e-08 | 0.60 | 0.00 | 0.96 | FALSE |