TWAS
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Models
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Traits
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Traits
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Impedance of leg (left)
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chr16:55,526,487-57,089,130
Best TWAS P=1.08e-10 · Best GWAS P=4.8e-11 conditioned to 1
55.6M
55.8M
56M
56.2M
56.4M
56.6M
56.8M
57M
0
2
4
6
8
10
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
3
GTEx
Muscle Skeletal
GNAO1
0.06
0.00
lasso
3
0.00
1.1e-01
-6.4
-6.5
1.1e-10
0.96
0.02
0.81
TRUE
1
GTEx
Artery Tibial
GNAO1
0.13
0.12
lasso
4
0.11
6.0e-09
-6.0
6.3
3.1e-10
-0.88
0.05
0.95
FALSE
4
The Cancer Genome Atlas
Prostate Adenocarcinoma
GNAO1
0.06
0.00
blup
103
0.01
2.0e-02
4.4
6.0
1.7e-09
-0.68
0.05
0.63
FALSE
2
GTEx
Esophagus Muscularis
GNAO1
0.09
0.03
lasso
3
0.06
1.1e-04
4.6
5.2
1.5e-07
-0.44
0.20
0.59
FALSE