TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Impedance of arm (right)
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chr2:202,505,715-204,330,528
Best TWAS P=1.97e-08 · Best GWAS P=6.59e-09 conditioned to 0.781
202.5M
203M
203.5M
204M
0
2
4
6
8
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
3
The Cancer Genome Atlas
Kidney Renal Papillary Cell Carcinoma
FZD7
0.09
0.11
lasso
3
0.09
5.1e-06
5.6
5.6
2.0e-08
0.77
0.01
0.99
TRUE
2
YFS
Blood
FAM117B
0.47
0.52
lasso
14
0.57
1.7e-231
-4.7
5.3
1.3e-07
0.25
0.02
0.97
TRUE
1
METSIM
Adipose
RP11-686O6.1
0.02
0.01
bslmm
339
0.01
1.2e-02
4.5
-5.4
7.7e-08
-0.47
0.07
0.14
FALSE