[Hub]/) : Traits : Impedance of arm (left) :

chr12:53,926,889-55,370,164

Best TWAS P=6.62e-18 · Best GWAS P=1.9e-13 conditioned to 0.0595

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 YFS Blood CBX5 0.02 0.01 lasso 3 0.02 2.0e-07 6.2 5.9 4.9e-09 0.15 0.86 0.12 TRUE
2 The Cancer Genome Atlas Bladder Urothelial Carcinoma HOTAIR 0.07 0.06 enet 4 0.05 8.9e-05 -5.3 -5.4 6.8e-08 -0.22 0.02 0.97 FALSE
3 The Cancer Genome Atlas Head and Neck Squamous Cell Carcinoma HOXC5 0.02 0.00 blup 51 0.01 2.4e-02 7.2 8.6 6.6e-18 0.77 0.01 0.73 TRUE
4 The Cancer Genome Atlas Head and Neck Squamous Cell Carcinoma LOC400043 0.05 0.02 blup 31 0.03 4.6e-04 5.3 5.1 3.0e-07 0.23 0.00 0.94 FALSE
5 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma HOTAIR 0.08 0.13 enet 12 0.13 1.1e-14 -5.4 -5.3 1.4e-07 -0.23 0.02 0.98 FALSE
6 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma HOXC6 0.03 0.02 blup 50 0.03 3.9e-04 7.2 -8.1 5.1e-16 -0.81 0.01 0.97 FALSE
7 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma HOXC8 0.03 0.05 enet 5 0.04 2.4e-05 7.2 -7.8 8.9e-15 -0.92 0.01 0.99 FALSE
8 The Cancer Genome Atlas Liver Hepatocellular Carcinoma LOC400043 0.19 0.02 blup 31 0.04 8.6e-03 -1.4 5.3 1.5e-07 0.19 0.01 0.19 TRUE
9 The Cancer Genome Atlas Prostate Adenocarcinoma HOTAIR 0.10 0.12 lasso 3 0.11 1.8e-11 -5.3 -5.3 1.4e-07 -0.21 0.02 0.98 FALSE
10 The Cancer Genome Atlas Rectum Adenocarcinoma CBX5 0.16 0.10 lasso 4 0.11 1.5e-03 6.2 5.3 1.3e-07 0.03 0.01 0.70 FALSE
11 The Cancer Genome Atlas Rectum Adenocarcinoma LOC400043 0.26 0.07 blup 31 0.13 4.9e-04 5.3 5.7 1.5e-08 0.27 0.00 0.69 FALSE
12 The Cancer Genome Atlas Thyroid Carcinoma LOC400043 0.15 0.00 enet 9 0.07 4.7e-07 3.6 5.2 2.1e-07 0.20 0.01 0.96 FALSE
13 The Cancer Genome Atlas Uterine Corpus Endometrial Carcinoma FLJ12825 0.15 0.02 lasso 5 0.06 8.9e-03 7.3 6.7 2.2e-11 0.79 0.01 0.75 FALSE