TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Impedance of arm (left)
:
←
→
chr16:52,828,325-54,846,383
Best TWAS P=2.67e-23 · Best GWAS P=8.23e-100 conditioned to 1.07e-52
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
CommonMind
Brain Pre-frontal Cortex
FTO
0.11
0.00
bslmm
739
0.02
1.6e-03
-0.25
-9.9
2.7e-23
0.38
0.09
0.55
TRUE
2
GTEx
Testis
AKTIP
0.19
0.00
enet
26
0.00
1.9e-01
-0.73
-9.9
4.1e-23
0.51
0.03
0.40
TRUE
3
The Cancer Genome Atlas
Glioblastoma Multiforme
FTO
0.27
0.16
enet
13
0.14
6.7e-05
2.55
-8.1
7.3e-16
0.33
0.11
0.32
TRUE