Best TWAS P=1.12e-08 · Best GWAS P=8.64e-11 conditioned to 0.00179
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Thyroid | ALS2CL | 0.17 | 0.12 | lasso | 6 | 0.13 | 5.2e-10 | -4.8 | -5.6 | 2.6e-08 | -0.65 | 0.35 | 0.65 | FALSE |
| 2 | The Cancer Genome Atlas | Lung Adenocarcinoma | ALS2CL | 0.04 | 0.01 | blup | 74 | 0.02 | 1.2e-03 | 4.0 | 5.7 | 1.1e-08 | 0.84 | 0.01 | 0.90 | TRUE |