TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Impedance of arm (left)
:
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chr3:133,088,362-134,666,475
Best TWAS P=6.98e-11 · Best GWAS P=2e-11 conditioned to 2.04e-05
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Adipose Subcutaneous
RYK
0.07
0.00
lasso
3
0.00
0.307
-4.3
-6.5
7.0e-11
0.44
0.06
0.12
TRUE
3
The Cancer Genome Atlas
Thyroid Carcinoma
RYK
0.03
0.01
blup
63
0.01
0.020
-6.6
-6.3
2.7e-10
0.95
0.01
0.92
FALSE
2
The Cancer Genome Atlas
Kidney Renal Papillary Cell Carcinoma
RYK
0.09
0.01
blup
63
0.01
0.048
-6.6
-6.0
1.4e-09
0.89
0.01
0.67
FALSE