Best TWAS P=1.77e-09 · Best GWAS P=1.07e-16 conditioned to 1.79e-16
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Brain Frontal Cortex BA9 | TEX29 | 0.45 | 0.10 | lasso | 8 | 0.24 | 4.2e-07 | -4.8 | -6.0 | 1.8e-09 | -0.01 | 0.12 | 0.05 | TRUE |
| 2 | The Cancer Genome Atlas | Brain Lower Grade Glioma | ARHGEF7 | 0.09 | 0.07 | blup | 142 | 0.08 | 3.1e-09 | -4.3 | 5.7 | 9.5e-09 | -0.04 | 1.00 | 0.00 | FALSE |