Best TWAS P=6.61e-08 · Best GWAS P=1.12e-10 conditioned to 0.000287
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Artery Tibial | ZFP64 | 0.1 | 0.03 | lasso | 4 | 0.06 | 3.4e-05 | 1.7 | 5.4 | 6.6e-08 | -0.75 | 0.02 | 0.94 | TRUE |
2 | YFS | Blood | TSHZ2 | 0.1 | 0.03 | bslmm | 798 | 0.07 | 2.8e-22 | -6.1 | 5.2 | 2.5e-07 | -0.64 | 0.01 | 0.99 | FALSE |