[Hub]/) : Traits : Leg fat percentage (right) : ← →

chr20:61,590,782-62,912,463

Best TWAS P=2.04e-11 · Best GWAS P=5.03e-11 conditioned to 1

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex ARFRP1 0.07 0.07 lasso 3 0.06 5.3e-08 -6.1 5.9 3.7e-09 -0.95 0.01 0.99 FALSE
2 GTEx Testis RTEL1 0.19 0.06 lasso 5 0.14 8.0e-07 -4.0 -5.2 2.3e-07 0.61 0.16 0.68 FALSE
3 METSIM Adipose TPD52L2 0.03 0.00 bslmm 207 0.02 1.5e-03 4.1 5.3 1.2e-07 -0.68 0.02 0.71 FALSE
4 YFS Blood LIME1 0.12 0.19 enet 15 0.19 5.3e-59 -6.6 -6.7 2.0e-11 0.99 0.00 1.00 TRUE
5 The Cancer Genome Atlas Esophageal Carcinoma GMEB2 0.16 0.04 blup 64 0.05 1.0e-02 2.4 5.2 1.9e-07 -0.49 0.01 0.04 FALSE
6 The Cancer Genome Atlas Brain Lower Grade Glioma LIME1 0.02 0.03 blup 47 0.02 6.2e-03 -4.0 -5.6 1.7e-08 0.82 0.03 0.62 FALSE
7 The Cancer Genome Atlas Lung Adenocarcinoma TNFRSF6B 0.02 0.01 enet 7 0.01 6.9e-03 -4.5 -5.7 1.6e-08 0.92 0.02 0.87 FALSE
8 The Cancer Genome Atlas Ovarian Serous Cystadenocarcinoma TNFRSF6B 0.05 0.02 blup 44 0.03 2.9e-03 -6.2 -5.9 3.5e-09 0.92 0.01 0.69 FALSE
9 The Cancer Genome Atlas Prostate Adenocarcinoma ARFRP1 0.03 0.02 lasso 2 0.02 1.2e-03 -6.1 6.1 1.2e-09 -0.96 0.01 0.96 FALSE
10 The Cancer Genome Atlas Prostate Adenocarcinoma LIME1 0.04 0.05 blup 47 0.05 9.0e-06 -6.5 -6.5 7.2e-11 0.97 0.00 0.99 FALSE
11 The Cancer Genome Atlas Testicular Germ Cell Tumors LIME1 0.10 0.02 blup 47 0.04 1.5e-02 -6.2 -5.4 6.5e-08 0.90 0.01 0.63 FALSE
12 The Cancer Genome Atlas Thyroid Carcinoma ARFRP1 0.04 0.00 blup 51 0.00 1.3e-01 -6.6 5.1 3.0e-07 -0.80 0.01 0.67 FALSE