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chr20:46,838,455-48,603,940

Best TWAS P=1.89e-09 · Best GWAS P=1e-10 conditioned to 0.000233

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
8	The Cancer Genome Atlas	Brain Lower Grade Glioma	ARFGEF2	0.05	0.04	lasso	5	0.05	3.2e-06	-6.2	6.0	1.9e-09	-0.58	0.02	0.98	TRUE
1	CommonMind	Brain Pre-frontal Cortex	ARFGEF2	0.09	0.05	lasso	8	0.10	9.2e-13	-6.2	5.8	4.8e-09	-0.41	0.02	0.98	FALSE
2	CommonMind	Brain Pre-frontal Cortex	STAU1	0.09	0.00	bslmm	500	0.01	8.7e-03	2.4	5.6	2.4e-08	-0.54	0.05	0.84	FALSE
7	NTR	Blood	SNORD12B	0.03	0.05	lasso	8	0.05	1.9e-14	-5.2	5.5	3.4e-08	-0.51	0.50	0.50	FALSE
4	GTEx	Skin Sun Exposed Lower leg	ZFAS1	0.07	0.03	enet	14	0.05	5.8e-05	-5.2	-5.5	3.6e-08	0.55	0.41	0.45	FALSE
3	GTEx	Skin Not Sun Exposed Suprapubic	ZFAS1	0.16	0.04	enet	19	0.07	1.0e-04	-3.7	-5.5	4.6e-08	0.48	0.07	0.84	FALSE
6	METSIM	Adipose	ARFGEF2	0.04	0.03	lasso	12	0.02	9.8e-05	-5.9	5.2	1.7e-07	-0.50	0.09	0.90	FALSE
5	GTEx	Testis	ARFGEF2	0.20	0.20	lasso	7	0.24	5.4e-11	-3.8	5.2	2.1e-07	-0.51	0.09	0.91	FALSE
9	The Cancer Genome Atlas	Ovarian Serous Cystadenocarcinoma	C20orf199	0.05	0.06	lasso	4	0.06	1.0e-04	-5.1	-5.1	3.0e-07	0.51	0.00	0.95	FALSE