[Hub]/) : Traits : Leg fat percentage (right) :

chr20:46,838,455-48,603,940

Best TWAS P=1.89e-09 · Best GWAS P=1e-10 conditioned to 0.000233

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex ARFGEF2 0.09 0.05 lasso 8 0.10 9.2e-13 -6.2 5.8 4.8e-09 -0.41 0.02 0.98 FALSE
2 CommonMind Brain Pre-frontal Cortex STAU1 0.09 0.00 bslmm 500 0.01 8.7e-03 2.4 5.6 2.4e-08 -0.54 0.05 0.84 FALSE
3 GTEx Skin Not Sun Exposed Suprapubic ZFAS1 0.16 0.04 enet 19 0.07 1.0e-04 -3.7 -5.5 4.6e-08 0.48 0.07 0.84 FALSE
4 GTEx Skin Sun Exposed Lower leg ZFAS1 0.07 0.03 enet 14 0.05 5.8e-05 -5.2 -5.5 3.6e-08 0.55 0.41 0.45 FALSE
5 GTEx Testis ARFGEF2 0.20 0.20 lasso 7 0.24 5.4e-11 -3.8 5.2 2.1e-07 -0.51 0.09 0.91 FALSE
6 METSIM Adipose ARFGEF2 0.04 0.03 lasso 12 0.02 9.8e-05 -5.9 5.2 1.7e-07 -0.50 0.09 0.90 FALSE
7 NTR Blood SNORD12B 0.03 0.05 lasso 8 0.05 1.9e-14 -5.2 5.5 3.4e-08 -0.51 0.50 0.50 FALSE
8 The Cancer Genome Atlas Brain Lower Grade Glioma ARFGEF2 0.05 0.04 lasso 5 0.05 3.2e-06 -6.2 6.0 1.9e-09 -0.58 0.02 0.98 TRUE
9 The Cancer Genome Atlas Ovarian Serous Cystadenocarcinoma C20orf199 0.05 0.06 lasso 4 0.06 1.0e-04 -5.1 -5.1 3.0e-07 0.51 0.00 0.95 FALSE