Best TWAS P=7.09e-11 · Best GWAS P=8.03e-11 conditioned to 0.0323
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | SDCCAG8 | 0.09 | 0.04 | blup | 114 | 0.08 | 4.6e-07 | 2.5 | 5.3 | 8.9e-08 | -0.77 | 0.22 | 0.77 | FALSE |
| 2 | The Cancer Genome Atlas | Breast Invasive Carcinoma | SDCCAG8 | 0.06 | 0.04 | blup | 115 | 0.04 | 2.0e-08 | -6.3 | 5.6 | 2.6e-08 | -0.84 | 0.00 | 1.00 | FALSE |
| 3 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | SDCCAG8 | 0.06 | 0.02 | blup | 114 | 0.04 | 1.9e-05 | -4.9 | 6.5 | 7.1e-11 | -0.80 | 0.00 | 0.99 | TRUE |