TWAS
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Traits
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Leg fat percentage (right)
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chr1:243,298,257-243,910,067
Best TWAS P=7.09e-11 · Best GWAS P=8.03e-11 conditioned to 0.0323
243.3M
243.4M
243.5M
243.6M
243.7M
243.8M
243.9M
0
2
4
6
8
10
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
3
The Cancer Genome Atlas
Kidney Renal Clear Cell Carcinoma
SDCCAG8
0.06
0.02
blup
114
0.04
1.9e-05
-4.9
6.5
7.1e-11
-0.80
0.00
0.99
TRUE
2
The Cancer Genome Atlas
Breast Invasive Carcinoma
SDCCAG8
0.06
0.04
blup
115
0.04
2.0e-08
-6.3
5.6
2.6e-08
-0.84
0.00
1.00
FALSE
1
The Cancer Genome Atlas
Bladder Urothelial Carcinoma
SDCCAG8
0.09
0.04
blup
114
0.08
4.6e-07
2.5
5.3
8.9e-08
-0.77
0.22
0.77
FALSE