Best TWAS P=6.93e-08 · Best GWAS P=5.3e-08 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Whole Blood | MED27 | 0.12 | 0.05 | lasso | 5 | 0.04 | 1.1e-04 | 5.0 | 5.3 | 1.1e-07 | 0.97 | 0.02 | 0.98 | FALSE |
2 | YFS | Blood | MED27 | 0.05 | 0.06 | enet | 11 | 0.06 | 1.0e-19 | 5.3 | 5.4 | 6.9e-08 | 0.97 | 0.02 | 0.98 | TRUE |