Best TWAS P=7.92e-09 · Best GWAS P=1.82e-10 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Artery Aorta | TCF7L2 | 0.19 | 0.09 | lasso | 6 | 0.05 | 0.001 | -5.9 | 5.8 | 7.9e-09 | -0.95 | 0.02 | 0.98 | TRUE |
2 | NTR | Blood | VTI1A | 0.02 | 0.00 | blup | 610 | 0.00 | 0.011 | -1.6 | 5.6 | 2.1e-08 | -0.51 | 0.04 | 0.22 | FALSE |