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chr19:9,709,433-11,459,260

Best TWAS P=2.96e-14 · Best GWAS P=9.69e-14 conditioned to 1

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
9	The Cancer Genome Atlas	Brain Lower Grade Glioma	LOC147727	0.07	0.02	lasso	2	0.02	5.4e-03	7.3	-7.6	3.0e-14	-0.99	0.02	0.77	TRUE
5	GTEx	Testis	PDE4A	0.20	0.02	enet	39	0.04	6.4e-03	5.1	6.0	2.5e-09	0.06	0.06	0.05	TRUE
8	The Cancer Genome Atlas	Brain Lower Grade Glioma	FDX1L	0.06	0.00	blup	53	0.02	5.1e-03	-3.3	-5.2	2.6e-07	0.05	0.00	0.20	TRUE
3	GTEx	Muscle Skeletal	SLC44A2	0.19	0.18	lasso	5	0.19	5.1e-18	6.7	7.2	8.6e-13	0.79	0.62	0.38	FALSE
10	The Cancer Genome Atlas	Thyroid Carcinoma	SLC44A2	0.32	0.22	enet	14	0.25	3.8e-24	7.4	6.0	1.8e-09	0.85	0.01	0.99	FALSE
4	GTEx	Nerve Tibial	ILF3-AS1	0.14	0.04	lasso	3	0.08	3.8e-06	7.3	-5.9	4.2e-09	-0.77	0.02	0.96	FALSE
6	GTEx	Whole Blood	CTD-2369P2.8	0.12	0.11	lasso	3	0.10	9.2e-10	5.0	5.5	3.7e-08	0.06	1.00	0.00	FALSE
2	GTEx	Esophagus Mucosa	ILF3-AS1	0.11	0.00	lasso	4	0.00	2.5e-01	7.3	-5.4	8.1e-08	-0.77	0.03	0.77	FALSE
7	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	LOC147727	0.13	0.02	blup	28	0.04	7.2e-05	7.4	-5.3	1.0e-07	-0.76	0.02	0.82	FALSE
1	GTEx	Esophagus Mucosa	SLC44A2	0.13	0.00	lasso	6	0.02	1.4e-02	4.3	-5.3	1.3e-07	-0.46	0.08	0.49	FALSE