TWAS
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Traits
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Traits
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Leg fat percentage (left)
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chr16:1,828,839-2,488,693
Best TWAS P=1.63e-07 · Best GWAS P=8.32e-08 conditioned to 0.000361
1.8M
1.9M
2M
2.1M
2.2M
2.3M
2.4M
2.5M
0
2
4
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
The Cancer Genome Atlas
Thyroid Carcinoma
CASKIN1
0.06
0.02
blup
38
0.04
0.00015
-4.8
-5.2
1.6e-07
0.40
0.00
0.93
TRUE
2
The Cancer Genome Atlas
Thyroid Carcinoma
SLC9A3R2
0.06
0.03
lasso
5
0.03
0.00037
-3.8
5.2
2.0e-07
-0.77
0.03
0.87
FALSE