Best TWAS P=1.63e-07 · Best GWAS P=8.32e-08 conditioned to 0.000361
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Thyroid Carcinoma | CASKIN1 | 0.06 | 0.02 | blup | 38 | 0.04 | 0.00015 | -4.8 | -5.2 | 1.6e-07 | 0.40 | 0.00 | 0.93 | TRUE |
| 2 | The Cancer Genome Atlas | Thyroid Carcinoma | SLC9A3R2 | 0.06 | 0.03 | lasso | 5 | 0.03 | 0.00037 | -3.8 | 5.2 | 2.0e-07 | -0.77 | 0.03 | 0.87 | FALSE |