Best TWAS P=1.03e-07 · Best GWAS P=1.42e-10 conditioned to 2.77e-05
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | SGPL1 | 0.13 | 0.08 | enet | 28 | 0.08 | 1.0e-09 | -3.0 | -5.2 | 2.5e-07 | -0.21 | 1.00 | 0.00 | FALSE |
| 2 | GTEx | Artery Tibial | PCBD1 | 0.19 | 0.01 | lasso | 6 | 0.01 | 3.0e-02 | -3.6 | 5.3 | 1.0e-07 | 0.44 | 0.08 | 0.41 | TRUE |
| 3 | METSIM | Adipose | UNC5B | 0.06 | 0.00 | blup | 805 | 0.01 | 3.3e-02 | -3.2 | -5.3 | 1.4e-07 | -0.06 | 0.13 | 0.02 | TRUE |