Best TWAS P=9.28e-12 · Best GWAS P=3.25e-14 conditioned to 0.000184
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Brain Hypothalamus | AC004453.8 | 0.54 | 0.13 | lasso | 7 | 0.16 | 1.8e-04 | -2.1 | -5.9 | 4.9e-09 | 0.61 | 0.03 | 0.48 | FALSE |
| 2 | GTEx | Cells Transformed fibroblasts | ZMIZ2 | 0.12 | 0.09 | lasso | 4 | 0.06 | 2.3e-05 | -6.3 | -6.2 | 4.8e-10 | 0.66 | 0.09 | 0.90 | FALSE |
| 3 | The Cancer Genome Atlas | Brain Lower Grade Glioma | PPIA | 0.05 | 0.02 | enet | 5 | 0.03 | 7.7e-05 | -7.5 | -6.8 | 9.3e-12 | 0.75 | 0.00 | 0.92 | TRUE |