[Hub]/) : Traits : Arm fat percentage (right) : ← →

chr17:27,244,473-29,126,951

Best TWAS P=9.49e-10 · Best GWAS P=4.55e-10 conditioned to 0.0089

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex EFCAB5 0.11 0.18 blup 392 0.17 1.7e-20 -5.41 -5.9 3.0e-09 -0.58 0.10 0.90 FALSE
2 GTEx Brain Nucleus accumbens basal ganglia CORO6 0.11 0.10 lasso 2 0.05 2.2e-02 -5.11 5.2 2.5e-07 0.57 0.06 0.76 FALSE
3 GTEx Esophagus Muscularis SSH2 0.04 0.01 enet 10 0.00 3.3e-01 -4.80 -5.5 4.9e-08 -0.45 0.31 0.46 FALSE
4 GTEx Lung SSH2 0.08 0.05 lasso 6 0.06 2.7e-05 -4.57 -5.1 2.7e-07 -0.64 0.47 0.53 FALSE
5 The Cancer Genome Atlas Bladder Urothelial Carcinoma EFCAB5 0.06 0.08 lasso 2 0.07 1.4e-06 -4.90 -5.4 5.9e-08 -0.68 0.06 0.93 FALSE
6 The Cancer Genome Atlas Breast Invasive Carcinoma EFCAB5 0.02 0.04 lasso 4 0.04 1.9e-08 -5.41 -5.2 1.7e-07 -0.54 0.07 0.93 FALSE
7 The Cancer Genome Atlas Colon Adenocarcinoma CCDC55 0.15 0.01 blup 64 0.04 1.9e-03 -5.69 6.1 9.5e-10 0.72 0.02 0.58 TRUE
8 The Cancer Genome Atlas Colon Adenocarcinoma EFCAB5 0.06 0.05 blup 79 0.03 5.7e-03 -5.41 -5.4 5.9e-08 -0.56 0.04 0.93 FALSE
9 The Cancer Genome Atlas Esophageal Carcinoma CCDC55 0.27 0.00 blup 64 0.00 3.5e-01 -0.78 5.5 3.4e-08 0.89 0.01 0.37 FALSE
10 The Cancer Genome Atlas Prostate Adenocarcinoma EFCAB5 0.04 0.03 enet 10 0.02 6.0e-03 -5.39 -5.9 3.1e-09 -0.68 0.04 0.93 FALSE
11 The Cancer Genome Atlas Soft Tissue Sarcoma EFCAB5 0.06 0.07 lasso 2 0.05 8.2e-04 -5.41 -5.4 8.4e-08 -0.56 0.04 0.94 FALSE
12 The Cancer Genome Atlas Thyroid Carcinoma EFCAB5 0.11 0.18 enet 13 0.20 5.8e-19 -5.41 -5.4 7.7e-08 -0.58 0.11 0.89 FALSE